bulk-rna-seq-deconvolution-with-bulk2single

Installation
SKILL.md

Bulk RNA-seq deconvolution with Bulk2Single

Overview

Use this skill when a user wants to reconstruct single-cell profiles from bulk RNA-seq together with a matched reference scRNA-seq atlas. It follows t_bulk2single.ipynb, which demonstrates how to harmonise PDAC bulk replicates, train the beta-VAE generator, and benchmark the output cells against dentate gyrus scRNA-seq.

Installs
34
GitHub Stars
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First Seen
Jan 26, 2026
bulk-rna-seq-deconvolution-with-bulk2single — starlitnightly/omicverse