opentargets-database
Installation
SKILL.md
Open Targets Platform Database
Overview
Open Targets Platform integrates evidence from genetics, genomics, literature, and drug databases to systematically score target-disease associations for 60,000+ targets and 20,000+ diseases/phenotypes. The public GraphQL API (no authentication required) provides access to association scores, evidence from 20+ data sources (GWAS, ClinVar, ChEMBL, drugs, pathways, mouse models, expression), and detailed drug-target-disease triangles.
When to Use
- Ranking therapeutic targets for a disease by overall association score and evidence breakdown
- Finding all diseases associated with a gene of interest and their confidence scores
- Retrieving approved and investigational drugs for a target, with mechanism of action and clinical phase
- Assessing target druggability and tractability (small molecule, antibody, PROTAC likelihood)
- Pulling genetic association evidence (GWAS hits, variant-to-gene mappings) for a target-disease pair
- Exploring safety/adverse event data for a drug target from FAERS and literature
- For bioactivity IC50/Ki data use
chembl-database-bioactivity; for clinical trial details useclinicaltrials-database-search