scientific-schematics
Installation
SKILL.md
Scientific Schematics
Overview
Scientific schematics are illustrative figures that communicate biological mechanisms, experimental designs, or conceptual frameworks — as distinct from data-driven figures (graphs, heatmaps). A well-designed schematic makes a manuscript's key concept immediately comprehensible to a broad scientific audience, while a poorly designed one confuses reviewers and reduces the paper's impact. This guide covers the design decisions, tool selection, composition principles, and accessibility standards specific to biological schematics in peer-reviewed publications.
Key Concepts
1. Schematic Types and Their Purpose
Not all schematics serve the same function. Choosing the wrong type leads to overloaded or underspecified figures.
| Type | Purpose | Key Elements | Examples |
|---|---|---|---|
| Mechanism diagram | Show step-by-step molecular events | Proteins, DNA, membranes, arrows indicating causality | CRISPR cleavage, signaling cascade, transcription factor binding |
| Pathway diagram | Show relationships in a network | Nodes (proteins/metabolites), edges (activation/inhibition), direction | MAPK signaling, metabolic flux, gene regulatory network |
| Experimental workflow | Show experimental protocol as a figure | Numbered steps, icons for equipment/samples, time arrows | Single-cell sequencing pipeline, drug treatment protocol |
| Graphical abstract | 1-panel summary of entire paper | 2–4 key findings, minimal text, journal-specified dimensions | Cell, Nature, PNAS graphical abstracts |
| Structural diagram | Show molecular structure/conformation | Ribbon structure, surface representation, active site | Protein domain schematic, ligand binding pocket |