ncbi-clinicaltables-skill

Installation
SKILL.md

Operating rules

  • Use scripts/ncbi_gene_clinicaltables.py for all Clinical Tables gene searches.
  • The script accepts max_items; for search pages, start with count=10 and max_items=10.
  • Use params for endpoint options like df, ef, sf, q, offset, and count.
  • Prefer ncbi-entrez-skill when the user wants general Entrez Gene records rather than autocomplete/search rows.
  • Page with offset instead of asking for large pulls.
  • Re-run requests in long conversations instead of relying on older tool output.
  • Treat displayed ... in tool previews as UI truncation, not literal request content.
  • If the user asks for the full payload, set save_raw=true and report the saved file path instead of pasting large response arrays into chat.

Execution behavior

  • Return concise markdown summaries from the script JSON by default.
  • Return the JSON verbatim only if the user explicitly asks for machine-readable output.
  • Use terms for the primary search text.
  • Keep count modest and page with offset instead of pulling large result sets at once.

Input

  • Read one JSON object from stdin.
  • Required field: terms
Related skills

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