cosmic-database

Installation
SKILL.md

Source: https://github.com/aipoch/medical-research-skills

COSMIC Database Skill

When to Use

  • Use this skill when you need access cosmic to download mutation datasets, query cancer gene census, and retrieve mutational signatures when your genomic analysis requires curated somatic mutation resources in a reproducible workflow.
  • Use this skill when a evidence insight task needs a packaged method instead of ad-hoc freeform output.
  • Use this skill when the user expects a concrete deliverable, validation step, or file-based result.
  • Use this skill when scripts/download_cosmic.py is the most direct path to complete the request.
  • Use this skill when you need the cosmic-database package behavior rather than a generic answer.

Key Features

  • Scope-focused workflow aligned to: Access COSMIC to download mutation datasets, query Cancer Gene Census, and retrieve mutational signatures when your genomic analysis requires curated somatic mutation resources.
  • Packaged executable path(s): scripts/download_cosmic.py.
  • Reference material available in references/ for task-specific guidance.
  • Structured execution path designed to keep outputs consistent and reviewable.

Dependencies

Installs
1
GitHub Stars
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First Seen
Sep 23, 2026