kegg-database

Installation
SKILL.md

Source: https://github.com/aipoch/medical-research-skills

When to Use

  • You need to fetch KEGG pathway, gene, compound, enzyme, disease, or drug records directly from the KEGG REST API.
  • You want to perform gene ↔ pathway mapping (e.g., building inputs for pathway enrichment or reporting).
  • You need cross-references between KEGG databases (e.g., pathway → genes, gene → KO, pathway → compounds).
  • You must convert identifiers between KEGG and external databases (e.g., KEGG gene → NCBI Gene ID / UniProt; KEGG compound → PubChem).
  • You need drug–drug interaction (DDI) lookups for KEGG drug IDs.

Note: KEGG REST access is intended for academic use. Non-academic/commercial use may require a separate KEGG license.

Key Features

Installs
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GitHub Stars
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First Seen
Sep 23, 2026
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