metabolomics-workbench-database

Installation
SKILL.md

Source: https://github.com/aipoch/medical-research-skills

Metabolomics Workbench Database

When to Use

  • Use this skill when you need access nih metabolomics workbench (4,200+ studies) via rest api. query metabolites, refmet nomenclature, ms/nmr data, m/z search, study metadata for metabolomics and biomarker discovery in a reproducible workflow.
  • Use this skill when a data analytics task needs a packaged method instead of ad-hoc freeform output.
  • Use this skill when the user expects a concrete deliverable, validation step, or file-based result.
  • Use this skill when the documented workflow in this package is the most direct path to complete the request.
  • Use this skill when you need the metabolomics-workbench-database package behavior rather than a generic answer.

Key Features

  • Scope-focused workflow aligned to: Access NIH Metabolomics Workbench (4,200+ studies) via REST API. Query metabolites, RefMet nomenclature, MS/NMR data, m/z search, study metadata for metabolomics and biomarker discovery.
  • Documentation-first workflow with no packaged script requirement.
  • Reference material available in references/ for task-specific guidance.
  • Structured execution path designed to keep outputs consistent and reviewable.

Dependencies

Installs
1
GitHub Stars
2.0K
First Seen
Sep 23, 2026