outcome-extraction-for-clinical-trials
Installation
SKILL.md
Clinical Outcome Extraction
Extract structured outcome data from clinical research papers for meta-analysis.
When to Use
- Use this skill when you need clinical research outcome extraction for meta-analysis. use when users need to extract outcome measures (binary, continuous, or survival data) from clinical research papers for systematic review and meta-analysis. handles both database lookup by pmid and real-time llm extraction in a reproducible workflow.
- Use this skill when a data analytics task needs a packaged method instead of ad-hoc freeform output.
- Use this skill when the user expects a concrete deliverable, validation step, or file-based result.
- Use this skill when
scripts/extract_pdf.pyis the most direct path to complete the request. - Use this skill when you need the
outcome-extraction for clinical trialspackage behavior rather than a generic answer.
Key Features
- Scope-focused workflow aligned to: Clinical research outcome extraction for meta-analysis. Use when users need to extract outcome measures (binary, continuous, or survival data) from clinical research papers for systematic review and meta-analysis. Handles both database lookup by PMID and real-time LLM extraction.
- Packaged executable path(s):
scripts/extract_pdf.py. - Reference material available in
references/for task-specific guidance. - Structured execution path designed to keep outputs consistent and reviewable.