ppi-network-analysis
Installation
SKILL.md
PPI Network Analysis
When to Read External Files
| Situation | File to Read | Purpose |
|---|---|---|
| Need algorithm details | references/algorithm.md |
Explain local STRING mapping, interaction filtering, network metrics, and plot interpretation |
| Need to execute the analysis | scripts/main.R |
Run the CLI entry point with a complete Rscript command |
| Encounter an error | references/troubleshooting.md |
Map standardized error codes to causes and fixes |
| Need CLI examples or baseline usage | references/cli-guide.md |
Review installation notes, offline cache requirements, and runnable examples |
| Need a runnable smoke test | tests/data/ |
Use the bundled small gene list for verification |