pubchem-database-skill

Installation
SKILL.md

Source: https://github.com/aipoch/medical-research-skills

When to Use

  • You need to search for chemical compounds by name, CID, SMILES, InChI, or molecular formula.
  • You want to retrieve physicochemical properties (e.g., molecular weight, LogP, TPSA, H-bond donors/acceptors).
  • You need to perform structure-based searches, such as similarity or substructure queries.
  • You want to obtain bioactivity data (e.g., assay summaries, target information) for a given compound.
  • You are building an automated cheminformatics or drug discovery workflow that requires programmatic access to PubChem.

Key Features

  • Flexible compound search by name, CID, SMILES, InChI, or formula.
  • Property retrieval via PubChem PUG-REST and PubChemPy (e.g., MW, LogP, Canonical SMILES).
  • Structure search:
Installs
1
GitHub Stars
2.0K
First Seen
Sep 23, 2026
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