Source: https://github.com/aipoch/medical-research-skills

Volcano Plot Script Generator

A skill for generating publication-ready volcano plots from differential gene expression analysis results.

When to Use

• Use this skill when the task is to Generate R/Python code for volcano plots from DEG (Differentially Expressed Genes) analysis results. Triggered when user needs visualization of gene expression data, p-value vs fold-change scatter plots, publication-ready figures for bioinformatics analysis.
• Use this skill for data analysis tasks that require explicit assumptions, bounded scope, and a reproducible output format.
• Use this skill when you need a documented fallback path for missing inputs, execution errors, or partial evidence.

Key Features

• Scope-focused workflow aligned to: Generate R/Python code for volcano plots from DEG (Differentially Expressed Genes) analysis results. Triggered when user needs visualization of gene expression data, p-value vs fold-change scatter plots, publication-ready figures for bioinformatics analysis.
• Packaged executable path(s): scripts/main.py.
• Reference material available in references/ for task-specific guidance.
• Reusable packaged asset(s), including assets/example_volcano.R.
• Structured execution path designed to keep outputs consistent and reviewable.