Flag	Effect
`--json`	Compact JSON output (single line)
`--pretty`	Pretty-printed JSON
`-v` / `-vv` / `-vvv`	Log verbosity: warn / info / debug
`-q` / `--quiet`	Suppress non-essential stderr

Format auto-detection: TTY → compact human-readable; pipe → json-compact. Override with --json, --pretty, or -o FORMAT.

Quick Start

# Fastest path: import + analyze, bridge starts automatically
ghidra import ./binary --project myproject
ghidra analyze --project myproject --program mybinary

# All subsequent queries reuse the running bridge
ghidra function list --project myproject
ghidra decompile main --project myproject

Command Reference

Bridge Lifecycle

ghidra start [--project P] [--program PROG]
ghidra stop [--project P]
ghidra restart [--project P] [--program PROG]
ghidra status [--project P]
ghidra ping [--project P]

Project Management

ghidra project create NAME
ghidra project list
ghidra project info [NAME]
ghidra project delete NAME

Import & Analysis

ghidra import BINARY [--project P] [--program PROG] [--detach]
ghidra analyze [--project P] [--program PROG] [--detach]

Both auto-start bridge. --detach returns immediately.

Program Management

ghidra program list [--project P]          # alias: prog, programs
ghidra program open --program PROG [--project P]   # --program required by runtime
ghidra program close [--project P]
ghidra program delete --program PROG [--project P]
ghidra program info [--project P]
ghidra program export FORMAT [--project P] [-o OUTPUT]   # FORMAT: xml, json, asm, c

Function Operations

ghidra function list [QUERY_OPTS]           # aliases: fn, func, functions
ghidra function get TARGET [QUERY_OPTS]     # TARGET = name or 0xADDRESS
ghidra function decompile TARGET [QUERY_OPTS]
ghidra function disasm TARGET [QUERY_OPTS]
ghidra function calls TARGET [QUERY_OPTS]   # outgoing calls
ghidra function xrefs TARGET [QUERY_OPTS]   # incoming references
ghidra function rename OLD NEW [--project P] [--program PROG]
ghidra function create ADDRESS [NAME] [--project P] [--program PROG]
ghidra function delete TARGET [QUERY_OPTS]

Top-level Shortcuts

ghidra decompile TARGET [QUERY_OPTS]        # aliases: decomp, dec
ghidra disasm TARGET [-n COUNT] [QUERY_OPTS]   # TARGET = name or 0xADDRESS; aliases: disassemble, dis

String Operations

ghidra strings list [QUERY_OPTS]            # aliases: string, str
ghidra strings refs STRING [QUERY_OPTS]     # xrefs to string

Symbol Operations

ghidra symbol list [QUERY_OPTS]             # aliases: sym, symbols
ghidra symbol get NAME [QUERY_OPTS]
ghidra symbol create ADDRESS NAME [--project P] [--program PROG]
ghidra symbol delete NAME [QUERY_OPTS]
ghidra symbol rename OLD NEW [--project P] [--program PROG]

Memory Operations

ghidra memory map [QUERY_OPTS]              # alias: mem
ghidra memory read ADDRESS SIZE [QUERY_OPTS]
ghidra memory write ADDRESS BYTES [--project P] [--program PROG]
ghidra memory search PATTERN [QUERY_OPTS]

Cross-References

ghidra x-ref to ADDRESS [QUERY_OPTS]        # aliases: xref, xrefs, crossref
ghidra x-ref from ADDRESS [QUERY_OPTS]
ghidra x-ref list [TARGET] [QUERY_OPTS]

Note: x-ref list currently accepts an optional target in clap, but runtime ignores it and lists all xrefs.

Type Operations

ghidra type list [QUERY_OPTS]               # alias: types
ghidra type get NAME [QUERY_OPTS]
ghidra type create DEFINITION [--project P] [--program PROG]
ghidra type apply ADDRESS TYPE_NAME [--project P] [--program PROG]

Comment Operations

ghidra comment list [QUERY_OPTS]            # alias: comments
ghidra comment get ADDRESS [QUERY_OPTS]
ghidra comment set ADDRESS TEXT [--comment-type TYPE] [--project P] [--program PROG]
ghidra comment delete ADDRESS [QUERY_OPTS]

Note: current bridge expects comment_type, but client sends type; in practice comment type falls back to EOL.

Search / Find

ghidra find string PATTERN [QUERY_OPTS]     # alias: search
ghidra find bytes HEX [QUERY_OPTS]
ghidra find function PATTERN [QUERY_OPTS]   # glob patterns
ghidra find calls FUNCTION [QUERY_OPTS]
ghidra find crypto [QUERY_OPTS]             # detect AES/SHA/RSA constants
ghidra find interesting [QUERY_OPTS]        # suspicious patterns

Graph / Call Graph

ghidra graph calls [QUERY_OPTS]             # aliases: callgraph, cg
ghidra graph callers FUNCTION [--depth N] [QUERY_OPTS]
ghidra graph callees FUNCTION [--depth N] [QUERY_OPTS]
ghidra graph export FORMAT [QUERY_OPTS]     # FORMAT: dot, json

Diff

ghidra diff programs PROG1 PROG2 [--project P] [--format F]
ghidra diff functions FUNC1 FUNC2 [--project P] [--format F]

Dump / Export

ghidra dump imports [QUERY_OPTS]            # alias: export
ghidra dump exports [QUERY_OPTS]
ghidra dump functions [QUERY_OPTS]
ghidra dump strings [QUERY_OPTS]

Patch

ghidra patch bytes ADDRESS HEX [--project P] [--program PROG]
ghidra patch nop ADDRESS [--count N] [--project P] [--program PROG]
ghidra patch export -o OUTPUT [--project P] [--program PROG]

Note: --count is parsed but currently not forwarded to the bridge. Runtime NOP behavior is single-address based.

Script Execution

ghidra script run PATH [--project P] [--program PROG] [-- ARGS...]
ghidra script python CODE [--project P] [--program PROG]
ghidra script java CODE [--project P] [--program PROG]
ghidra script list

Batch

ghidra batch SCRIPT_FILE [--project P] [--program PROG]

Batch file: one subcommand per line (without ghidra prefix), # comments.

Universal Query

ghidra query DATA_TYPE [QUERY_OPTS]

DATA_TYPE: functions, strings, imports, exports, memory.

Statistics & Info

ghidra summary [QUERY_OPTS]       # alias: info
ghidra stats [QUERY_OPTS]

Configuration

ghidra init                       # create config
ghidra doctor                     # check installation
ghidra version
ghidra config list
ghidra config get KEY
ghidra config set KEY VALUE       # keys: ghidra_install_dir, ghidra_project_dir, default_program, default_project, default_output_format, timeout, default_limit
ghidra config reset
ghidra set-default KIND VALUE     # KIND: program, project
ghidra setup [--version V] [--dir D] [--force]

Common Query Options (QUERY_OPTS)

All query commands accept these:

Option	Description
`--project P`	Project name or path
`--program PROG`	Program within project
`--filter EXPR`	Filter expression
`--fields LIST`	Comma-separated fields to return
`-o FORMAT`	Output format
`--limit N`	Max results
`--offset N`	Skip first N
`--sort FIELDS`	Sort: comma-separated, prefix `-` for descending
`--count`	Return count only
`--json`	Shorthand for `--format=json`

Output Formats

Value	Use
`compact`	Default for TTY. One line per item.
`full`	Multi-line labeled blocks
`json`	Pretty JSON
`json-compact`	Default for pipes. Single-line JSON.
`json-stream` / `ndjson`	One JSON object per line
`csv` / `tsv`	Delimited with header
`table`	ASCII box-drawn table
`count`	Number only
`ids` / `minimal`	Address/name only, one per line
`tree`	Indented hierarchy
`hex`	Hex dump
`asm`	Assembly
`c`	C pseudocode

Filter Expressions

# Numeric
--filter "size > 100"
--filter "size >= 50"

# String
--filter "name contains 'crypt'"

# Combined
--filter "size > 100 and name contains 'main'"
--filter "name != 'main'"

Operators: >, <, >=, <=, =, !=, contains, in, and, or.

Agent Best Practices

1. Count-First Pattern

Always check result volume before fetching:

ghidra function list --count --project P
# If manageable:
ghidra function list --limit 50 --fields name,address,size --project P

2. Aggressive Filtering

Pre-filter server-side, not client-side:

# GOOD
ghidra function list --filter "size > 1000" --project P
# BAD
ghidra function list --project P  # then filter in agent code

3. Field Selection

Request only needed fields:

ghidra function list --fields name,address --json --project P

4. Set Defaults

Avoid repeating --project and --program:

ghidra set-default project myproject
ghidra set-default program mybinary
# Now: ghidra function list  (no flags needed)

.NET Warning

ghidra decompile emits a warning for .NET IL bytecode:

"This appears to be .NET managed code. Consider using ilspy-cli."

Use ilspy detect to classify binaries before decompiling.

Analysis Workflow

# 1. Import and analyze
ghidra import ./target.exe --project analysis
ghidra analyze --project analysis

# 2. Recon
ghidra summary --project analysis
ghidra function list --count --project analysis
ghidra function list --filter "NOT name contains 'FUN_'" --fields name,address,size --limit 30 --project analysis

# 3. Investigate
ghidra decompile main --project analysis
ghidra find crypto --project analysis
ghidra find string "password" --project analysis

# 4. Deep dive
ghidra graph callers suspicious_func --depth 3 --project analysis
ghidra x-ref to 0x401000 --project analysis
ghidra function disasm 0x401000 --project analysis

# 5. Patch
ghidra patch nop 0x401234 --count 3 --project analysis
ghidra patch export -o patched.exe --project analysis

Environment Variables

Variable	Purpose
`GHIDRA_INSTALL_DIR`	Ghidra installation path
`GHIDRA_PROJECT_DIR`	Base directory for projects
`GHIDRA_DEFAULT_PROJECT`	Default `--project` for `ghidra query`
`GHIDRA_DEFAULT_PROGRAM`	Default `--program` for `ghidra query` and program auto-selection
`GHIDRA_CLI_CONFIG`	Override config path

File Locations

File	Purpose
`~/.local/share/ghidra-cli/bridge-{md5}.port`	TCP port for running bridge
`~/.local/share/ghidra-cli/bridge-{md5}.pid`	Bridge process PID
`~/.config/ghidra-cli/config.yaml`	Configuration
`~/.config/ghidra-cli/scripts/GhidraCliBridge.java`	Materialized Java bridge script
`~/.local/share/ghidra-cli/ghidra-cli.log`	Debug log

Error Recovery

Problem	Fix
"No project specified"	Add `--project NAME` or `ghidra set-default project NAME`
"Bridge not responding"	`ghidra stop --project P` then retry (auto-starts)
"Ghidra installation not configured"	`ghidra setup` or set `GHIDRA_INSTALL_DIR`
Function not found	Use `ghidra find function "pattern"`
Slow first command	Normal: bridge startup + analysis takes seconds

ghidra-cli

ghidra-cli Agent Reference

Architecture

Global Flags