The Agent Skills Directory

[SAFE]: The skill facilitates legitimate scientific research and machine learning workflows for genomic data analysis. No suspicious patterns, obfuscation, or malicious intent were detected in the provided instructions or code snippets.
[EXTERNAL_DOWNLOADS]: The skill references the installation of the geniml package from PyPI and its official GitHub repository (databio/geniml). It also includes the StarSpace tool from Facebook Research's GitHub repository as a dependency for specific modules.
[EXTERNAL_DOWNLOADS]: The BBClient utility is provided to enable the downloading and caching of BED files from remote genomic repositories such as BEDbase.
[COMMAND_EXECUTION]: Examples for using the geniml command-line interface and supporting tools like uniwig are provided to guide users through standard genomic data processing and model training pipelines.

alterlab-geniml