The Agent Skills Directory

[COMMAND_EXECUTION]: The skill uses uv run python and python to execute standard bioinformatics scripts (parse_multiple_chains.py, protein_mpnn_run.py) from the well-known dauparas/ProteinMPNN repository. These are legitimate operations for the skill's stated purpose of protein sequence design.
[EXTERNAL_DOWNLOADS]: The skill mentions cloning the dauparas/ProteinMPNN repository from GitHub. This is a standard practice for using this specific academic tool and is documented neutrally.
[SAFE]: No malicious patterns such as prompt injection, obfuscation, data exfiltration, or persistence mechanisms were detected. The skill primarily serves as a wrapper for academic research tools.

alterlab-proteinmpnn