The Agent Skills Directory

[COMMAND_EXECUTION]: The skill utilizes the Bash(python:*) tool to execute a local utility script, scripts/query_pubmed.py, which manages interactions with the PubMed API.
[INDIRECT_PROMPT_INJECTION]: The skill ingests untrusted data from the external PubMed API, which the agent then processes, creating a theoretical injection surface.
Ingestion points: Literature citations, abstracts, and metadata are retrieved from the NCBI E-utilities API via the scripts/query_pubmed.py script.
Boundary markers: The instructions do not specify any delimiters or safety markers to help the agent distinguish between literature content and its own instructions.
Capability inventory: The skill is configured to use Bash for local script execution and WebFetch for network operations targeting the ncbi.nlm.nih.gov domain.
Sanitization: The Python script uses urllib.parse.urlencode for parameter serialization and json.loads for response parsing, providing standard handling for the API communication.

alterlab-pubmed