px trace list
px trace get <trace-id>
px trace annotate <trace-id>
px trace add-note <trace-id>
px trace-annotations delete
px span list
px span annotate <span-id>
px span add-note <span-id>
px span-annotations delete
px session list
px session get <session-id>
px session annotate <session-id>
px session add-note <session-id>
px session-annotations delete
px dataset list
px dataset get <name>
px project list
px project get <name>
px annotation-config list
px auth status
px profile list
px profile show [name]
px profile create <name>
px profile use <name>
px profile edit <name>
px profile delete <name>

Setup

export PHOENIX_HOST=http://localhost:6006
export PHOENIX_PROJECT=my-project
export PHOENIX_API_KEY=your-api-key  # if auth is enabled

Always use --format raw --no-progress when piping to jq.

Quick Reference

Task	Files
Look at sampled traces, spans, or sessions and write specific notes about what went wrong (no taxonomy yet)	references/open-coding
Group those notes into a structured failure taxonomy and quantify what matters	references/axial-coding

Both stages tag every artifact with one shared coding annotation identifier (descriptive shape, e.g. coding-run:chatbot-context-loss-2026-05-06) so the run is queryable, reversible, and viewable as a unit. Pass --identifier <value> explicitly on every px call — shell inheritance is unreliable across agent harnesses. Open coding writes notes via px ... add-note and records a small local JSONL sidecar at .px/coding/<sanitized-identifier>.jsonl; axial coding reads that sidecar as the deterministic handoff and records labels in .px/coding/<sanitized-identifier>-axial.jsonl. Pick the identifier once per run (see references/open-coding.md), then share the Phoenix UI link from the wrap-up section. Revert is opt-in and runs three identifier-bound DELETEs only after explicit user confirmation.

Workflow term vs. server annotation name. The skill prose calls this value the coding annotation identifier (shell-variable hint: CODING_ANNOTATION_IDENTIFIER). The server-side annotation NAME used for the UI filter is unchanged — coding_session_id — for data compatibility with rows already written by previous runs. Don't try to rename the server-side annotation; treat the asymmetry as load-bearing.

Workflows

"What do I do after instrumenting?" / "Where do I focus?" / "What's going wrong?" open-coding → axial-coding → build evals for the top categories.

Reference Categories

Prefix	Description
`references/open-coding`	Free-form notes against sampled traces, spans, or sessions — reach for it whenever the user wants to make sense of LLM traffic but has no failure categories yet. Includes a unit-of-analysis diagnostic so the workflow runs at the level the failure modes actually live at (trace for stateless single-shot calls, session for multi-turn agents, span for mechanical/in-isolation failures).
`references/axial-coding`	Inductive grouping of notes into a MECE taxonomy with counts — reach for it whenever the user has observations and needs categories or eval targets

Auth

px auth status                                # check connection and authentication
px auth status --endpoint http://other:6006   # check a specific endpoint
px auth status --profile staging              # check a named profile's connection

Profiles

Named profiles let you switch between multiple Phoenix instances (local, staging, cloud) without juggling environment variables. Profiles are stored in ~/.px/settings.json (or $XDG_CONFIG_HOME/px/settings.json).

Configuration priority (highest to lowest): CLI flags > env vars > active profile > built-in defaults.

px profile list                              # list all profiles (shows active profile)
px profile show                              # show the active profile's settings
px profile show staging                      # show a named profile's settings
px profile create prod --endpoint https://app.phoenix.arize.com --api-key <key> --activate
px profile create local --endpoint http://localhost:6006 --project my-app
px profile use prod                          # switch the active profile
px profile edit prod                         # open profile JSON in $EDITOR (validates on save)
px profile delete prod --yes                 # delete a profile (--yes skips confirmation)

Use --profile <name> on any command to target a specific profile without changing the active one:

px trace list --profile staging --limit 10 --format raw --no-progress | jq .
px auth status --profile prod

px profile create options: --endpoint <url>, --project <name>, --api-key <key>, --header <key=value> (repeatable), --activate.

Projects

px project list                                            # list all projects (table view)
px project list --format raw --no-progress | jq '.[].name' # project names as JSON
px project get my-project --format raw --no-progress       # single record by exact name
px project get my-project --format raw --no-progress | jq -r '.id'  # extract project id

project get exits with ExitCode.FAILURE (1) on a name miss and writes a StructuredError {error, code: "FAILURE", hint} to stderr in --format json|raw.

Traces

px trace list --limit 20 --format raw --no-progress | jq .
px trace list --last-n-minutes 60 --limit 20 --format raw --no-progress | jq '.[] | select(.status == "ERROR")'
px trace list --since 2025-01-15T00:00:00Z --limit 50 --format raw --no-progress | jq .
px trace list --format raw --no-progress | jq 'sort_by(-.duration) | .[0:5]'
px trace list --include-notes --format raw --no-progress | jq '.[].notes'
px trace get <trace-id> --format raw | jq .
px trace get <trace-id> --format raw | jq '.spans[] | select(.status_code != "OK")'
px trace get <trace-id> --include-notes --format raw | jq '.notes'
px trace annotate <trace-id> --name reviewer --label pass
px trace annotate <trace-id> --name reviewer --score 0.9 --format raw --no-progress
px trace annotate <trace-id> --name reviewer --label pass --identifier "<coding-annotation-id>"  # tag with a coding annotation identifier
px trace add-note <trace-id> --text "needs follow-up"
px trace add-note <trace-id> --text "needs follow-up" --identifier "<coding-annotation-id>"  # tag + upsert on identifier
px trace-annotations delete --identifier "<coding-annotation-id>" --all -y            # nuke every annotation tied to this coding annotation identifier

px <entity>-annotations delete requires --all or both --start-time and --end-time and emits {deleted: true, target, filter} on success.

Trace JSON shape

Trace
  traceId, status ("OK"|"ERROR"), duration (ms), startTime, endTime
  annotations[] (with --include-annotations, excludes note)
    name, result { score, label, explanation }
  notes[] (with --include-notes)
    name="note", result { explanation }
  rootSpan  — top-level span (parent_id: null)
  spans[]
    name, span_kind ("LLM"|"CHAIN"|"TOOL"|"RETRIEVER"|"EMBEDDING"|"AGENT"|"RERANKER"|"GUARDRAIL"|"EVALUATOR"|"UNKNOWN")
    status_code ("OK"|"ERROR"|"UNSET"), parent_id, context.span_id
    notes[] (with --include-notes)
      name="note", result { explanation }
    attributes
      input.value, output.value          — raw input/output
      llm.model_name, llm.provider
      llm.token_count.prompt/completion/total
      llm.token_count.prompt_details.cache_read
      llm.token_count.completion_details.reasoning
      llm.input_messages.{N}.message.role/content
      llm.output_messages.{N}.message.role/content
      llm.invocation_parameters          — JSON string (temperature, etc.)
      exception.message                  — set if span errored

Spans

px span list --limit 20                                    # recent spans (table view)
px span list --last-n-minutes 60 --limit 50                # spans from last hour
px span list --since 2025-01-15T00:00:00Z --limit 50       # spans since a timestamp
px span list --span-kind LLM --limit 10                    # only LLM spans
px span list --status-code ERROR --limit 20                # only errored spans
px span list --name chat_completion --limit 10             # filter by span name
px span list --trace-id <id> --format raw --no-progress | jq .   # all spans for a trace
px span list --parent-id null --limit 10                   # only root spans
px span list --parent-id <span-id> --limit 10              # only children of a span
px span list --include-annotations --limit 10              # include annotation scores
px span list --include-notes --limit 10                    # include span notes
px span list --attribute llm.model_name:gpt-4 --limit 10  # filter by string attribute
px span list --attribute llm.token_count.total:500 --limit 10  # filter by numeric attribute
px span list --attribute 'user.id:"12345"' --limit 10     # force string match for numeric-looking value
px span list --attribute session.id:sess:abc:123 --limit 20  # colon in value OK (split on first colon only)
px span list --attribute llm.model_name:gpt-4 --attribute session.id:abc --limit 10  # AND multiple filters
px span list output.json --limit 100                       # save to JSON file
px span list --format raw --no-progress | jq '.[] | select(.status_code == "ERROR")'
px span annotate <span-id> --name reviewer --label pass
px span annotate <span-id> --name checker --score 1 --annotator-kind CODE
px span annotate <span-id> --name reviewer --label pass --identifier "<coding-annotation-id>"  # tag with a coding annotation identifier
px span add-note <span-id> --text "verified by agent"
px span add-note <span-id> --text "verified by agent" --identifier "<coding-annotation-id>"  # tag + upsert on identifier
px span-annotations delete --identifier "<coding-annotation-id>" --all -y           # nuke every annotation tied to this coding annotation identifier

Span JSON shape

Span
  name, span_kind ("LLM"|"CHAIN"|"TOOL"|"RETRIEVER"|"EMBEDDING"|"AGENT"|"RERANKER"|"GUARDRAIL"|"EVALUATOR"|"UNKNOWN")
  status_code ("OK"|"ERROR"|"UNSET"), status_message
  context.span_id, context.trace_id, parent_id
  start_time, end_time
  attributes
    input.value, output.value          — raw input/output
    llm.model_name, llm.provider
    llm.token_count.prompt/completion/total
    llm.input_messages.{N}.message.role/content
    llm.output_messages.{N}.message.role/content
    llm.invocation_parameters          — JSON string (temperature, etc.)
    exception.message                  — set if span errored
  annotations[] (with --include-annotations, excludes note)
    name, result { score, label, explanation }
  notes[] (with --include-notes)
    name="note", result { explanation }

Sessions

px session list --limit 10 --format raw --no-progress | jq .
px session list --order asc --format raw --no-progress | jq '.[].session_id'
px session list --include-annotations --include-notes --format raw --no-progress | jq '.[].notes'
px session get <session-id> --format raw | jq .
px session get <session-id> --include-annotations --format raw | jq '.session.annotations'
px session get <session-id> --include-notes --format raw | jq '.session.notes'
px session annotate <session-id> --name reviewer --label pass
px session annotate <session-id> --name reviewer --score 0.9 --format raw --no-progress
px session annotate <session-id> --name reviewer --label pass --identifier "<coding-annotation-id>"  # tag with a coding annotation identifier
px session add-note <session-id> --text "verified by agent"
px session add-note <session-id> --text "verified by agent" --identifier "<coding-annotation-id>"  # tag + upsert on identifier
px session-annotations delete --identifier "<coding-annotation-id>" --all -y              # nuke every annotation tied to this coding annotation identifier

Session JSON shape

SessionData
  id, session_id, project_id
  start_time, end_time
  token_count_prompt, token_count_completion, token_count_total  — cumulative across all LLM spans in the session (int, default 0)
  annotations[] (with --include-annotations, excludes note)
    name, result { score, label, explanation }
  notes[] (with --include-notes)
    name="note", result { explanation }
  traces[]
    id, trace_id, start_time, end_time

Datasets / Experiments / Prompts

px dataset list --format raw --no-progress | jq '.[].name'
px dataset get <name> --format raw | jq '.examples[] | {input, output: .expected_output}'
px dataset get <name> --split train --format raw | jq .    # filter by split
px dataset get <name> --version <version-id> --format raw | jq .
px experiment list --dataset <name> --format raw --no-progress | jq '.[] | {id, name, failed_run_count}'
px experiment get <id> --format raw --no-progress | jq '.[] | select(.error != null) | {input, error}'
px prompt list --format raw --no-progress | jq '.[].name'
px prompt get <name> --format text --no-progress   # plain text, ideal for piping to AI

Annotation Configs

px annotation-config list                                           # list all configs (table view)
px annotation-config list --format raw --no-progress | jq '.[].name' # config names as JSON

GraphQL

For ad-hoc queries not covered by the commands above. Output is {"data": {...}}.

px api graphql '{ projectCount datasetCount promptCount evaluatorCount }'
px api graphql '{ projects { edges { node { name traceCount tokenCountTotal } } } }' | jq '.data.projects.edges[].node'
px api graphql '{ datasets { edges { node { name exampleCount experimentCount } } } }' | jq '.data.datasets.edges[].node'
px api graphql '{ evaluators { edges { node { name kind } } } }' | jq '.data.evaluators.edges[].node'
# evaluator kind values: "LLM" | "CODE" | "BUILTIN"
# CODE = server-side code evaluator running in a sandbox; BUILTIN = pre-built server evaluator

# Introspect any type
px api graphql '{ __type(name: "Project") { fields { name type { name } } } }' | jq '.data.__type.fields[]'

Key root fields: projects, datasets, prompts, evaluators, projectCount, datasetCount, promptCount, evaluatorCount, viewer.

Docs

Download Phoenix documentation markdown for local use by coding agents.

px docs fetch                                # fetch default workflow docs to .px/docs
px docs fetch --workflow tracing             # fetch only tracing docs
px docs fetch --workflow tracing --workflow evaluation
px docs fetch --dry-run                      # preview what would be downloaded
px docs fetch --refresh                      # clear .px/docs and re-download
px docs fetch --output-dir ./my-docs         # custom output directory

Key options: --workflow (repeatable, values: tracing, evaluation, datasets, prompts, integrations, sdk, self-hosting, all), --dry-run, --refresh, --output-dir (default .px/docs), --workers (default 10).

phoenix-cli

Phoenix CLI

Invocation