pubchem-database

Pass

Audited by Gen Agent Trust Hub on Apr 6, 2026

Risk Level: SAFE
Full Analysis
  • [SAFE]: The skill uses official and well-known PubChem API endpoints (pubchem.ncbi.nlm.nih.gov) for all data retrieval operations. All code examples and scripts demonstrate standard, legitimate use of the PUG-REST API and the PubChemPy library.
  • [SAFE]: The Python scripts (scripts/bioactivity_query.py and scripts/compound_search.py) implement responsible API usage through explicit rate limiting (e.g., REQUEST_DELAY = 0.21) and robust error handling for network requests.
  • [EXTERNAL_DOWNLOADS]: The skill documents dependencies on legitimate, well-known libraries such as pubchempy, requests, and pandas. These are standard tools for cheminformatics and data analysis.
  • [COMMAND_EXECUTION]: Command execution is limited to standard package installation instructions (uv pip install) and the execution of the provided utility scripts, which perform benign data retrieval tasks.
Audit Metadata
Risk Level
SAFE
Analyzed
Apr 6, 2026, 11:30 PM
Security Audit — agent-trust-hub — pubchem-database