loop-annotation

Pass

Audited by Gen Agent Trust Hub on Apr 15, 2026

Risk Level: SAFE
Full Analysis
  • [SAFE]: The skill implements a standard bioinformatics pipeline for chromatin loop annotation. No malicious patterns or indicators of data exfiltration were detected.
  • [COMMAND_EXECUTION]: The skill utilizes shell commands such as bedtools and sort to manipulate genomic data. These commands are hardcoded and used exclusively for the skill's primary data processing tasks.
  • [PROMPT_INJECTION]: The skill ingests untrusted user-provided files, which creates an indirect prompt injection surface. Ingestion points: Genomic data files (e.g., loops.bedpe, ctcf_peaks.bed) as defined in SKILL.md. Boundary markers: Absent. Capability inventory: Shell command execution and specialized bioinformatics MCP tools defined in SKILL.md. Sanitization: Absent.
Audit Metadata
Risk Level
SAFE
Analyzed
Apr 15, 2026, 06:12 AM
Security Audit — agent-trust-hub — loop-annotation