scikit-bio

Pass

Audited by Gen Agent Trust Hub on Nov 4, 2026

Risk Level: SAFEEXTERNAL_DOWNLOADSINDIRECT_PROMPT_INJECTION
Full Analysis
  • [EXTERNAL_DOWNLOADS]: The skill includes instructions to install the scikit-bio library, which is a well-known and legitimate biological data toolkit.
  • [INDIRECT_PROMPT_INJECTION]: The skill provides functionality to ingest and process biological data from external files (e.g., FASTA, FASTQ, BIOM, and Newick formats).
  • Ingestion points: Data is loaded via methods such as skbio.DNA.read(), TreeNode.read(), and Table.read() in SKILL.md and references/api_reference.md.
  • Boundary markers: No explicit boundary markers are used for the content of processed biological data.
  • Capability inventory: The skill is focused on data manipulation, phylogenetics, and diversity analysis; it does not contain capabilities for arbitrary shell execution, system modification, or network exfiltration.
  • Sanitization: Input is validated by the library's specialized sequence classes (DNA, RNA, Protein) which enforce strictly defined biological alphabets.
Audit Metadata
Risk Level
SAFE
Analyzed
Nov 4, 2026, 10:11 AM