The Agent Skills Directory

[SAFE]: The skill provides a comprehensive suite of scripts for scientific mass spectrometry data processing. All implemented behaviors align with the stated purpose of analyzing proteomics and metabolomics data using the established pyopenms library.
[EXTERNAL_DOWNLOADS]: The scripts/accurate_mass_search.py script includes instructions for the user to manually download a specific metadata file (HMDB2StructMapping.tsv) from the official OpenMS GitHub repository. This is a neutral reference to a well-known scientific software project to resolve a missing dependency in the pip wheel.
[INDIRECT_PROMPT_INJECTION]: The skill processes structured scientific data formats such as mzML, mzXML, and FASTA. While these files ingest data into the agent's context, the skill utilizes specific library-based parsers and handles data in a way that minimizes the risk of prompt injection from the processed files.

pyopenms