The Agent Skills Directory

[SAFE]: The skill provides comprehensive and legitimate documentation for the scvi-tools library, which is a standard tool in the bioinformatics community for analyzing single-cell data.
[EXTERNAL_DOWNLOADS]: The skill references standard package installation via uv pip install scvi-tools and the download of genomic reference data (e.g., hg38 genome) using built-in library functions. These are standard operations for this domain and target official, well-known repositories.
[COMMAND_EXECUTION]: The provided code snippets demonstrate standard use of shell commands for environment setup and Python scripts for data analysis. All commands are relevant to the skill's stated purpose of single-cell genomics analysis.
[INDIRECT_PROMPT_INJECTION]: While the skill involves processing external data files (AnnData, h5ad, CSV), this is the primary purpose of the tool. The analysis surface is consistent with scientific research workflows and does not introduce unusual risks beyond standard data processing.

scvi-tools