OpenMMDL Workflow Skill

Overview

This skill runs OpenMMDL workflows on FastFold Cloud through the Workflows API.

It supports:

1. Run now from local topology + optional ligand files.
2. Draft script mode (create_mode=draft_script) for script-first workflows.
3. Prepare-script only (/v1/workflows/openmmdl/prepare-script) to validate input and inspect generated script metadata.
4. Clone + rerun from an existing OpenMMDL workflow.
5. Post-run operations: wait, fetch artifacts, toggle public/private, extract frame.

Authentication

Preferred (Sandwalk agent): Integrations → Fastfold AI Cloud, exposed as FASTFOLD_API_KEY in the chat shell. Use env vars Sandwalk sets — do not hardcode or search home config paths.