Bio Annotation

Functional annotation and taxonomy inference from sequence homology.

Instructions

1. Read docs/README.md and the relevant tool guides before running anything.

2. Normalize tool outputs and generate the complete comparison bundle with the schema-backed driver:

   uv run --script skills/bio-annotation/scripts/build_annotation_artifacts.py \
     raw_annotations.tsv --genomes genomes.tsv --markers marker_catalog.tsv \
     --out results/bio-annotation