Bio Viromics

Detect, classify, and QC viral contigs.

Instructions

Tool guides and versions: docs/README.md.

1. Validate the pinned resource manifest and assemble the complete comparative evidence and reasoning bundle:

   uv run --script skills/bio-viromics/scripts/build_viromics_evidence.py \
     viral_metrics.tsv --resources resources.json --hypotheses hypotheses.tsv \
     --reflections reflections.tsv --comparative-dir comparison/ \
     --out results/bio-viromics