The Agent Skills Directory

[EXTERNAL_DOWNLOADS]: The skill communicates with the Adaptyv platform API hosted on AWS Lambda (lambda-url.eu-central-1.on.aws) and a protein solubility prediction service from the Technical University of Denmark (services.healthtech.dtu.dk). These are legitimate endpoints necessary for the skill's primary function.
[COMMAND_EXECUTION]: Instructions are provided for installing standard scientific and bioinformatics Python packages using the uv manager. These include biopython, pandas, torch, fair-esm, and specialized tools like soluprot and soluble-mpnn. All packages are established tools in the bioinformatics domain.
[PROMPT_INJECTION]: The skill processes external data, creating an ingestion surface.
Ingestion points: Protein sequences in FASTA format and user-provided webhook URLs for experiment completion notifications in SKILL.md and reference/examples.md.
Boundary markers: The reference/examples.md file includes a validate_fasta function designed to ensure input sequences only contain valid amino acid characters.
Capability inventory: Uses the requests library to communicate with remote APIs and the open function to save result files locally.
Sanitization: Implements character-level validation for protein sequences to prevent malformed data processing.
[SAFE]: No evidence of credential exfiltration, persistence mechanisms, or obfuscated content was found. The use of environment variables for API key management follows standard security best practices.

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