alphagenome-variant-impact-score
Pass
Audited by Gen Agent Trust Hub on Sep 16, 2026
Risk Level: SAFEEXTERNAL_DOWNLOADSINDIRECT_PROMPT_INJECTION
Full Analysis
- [EXTERNAL_DOWNLOADS]: The skill downloads a GENCODE v46 GTF reference dataset in Feather format from a Google Cloud Storage bucket (
storage.googleapis.com/alphagenome). This is a legitimate vendor resource used for gene structure analysis. - [INDIRECT_PROMPT_INJECTION]: The skill ingests and processes genomic variant data from external files (VCF, CSV, TSV, Parquet) which could theoretically contain malicious instructions.
- Ingestion points: Input variant files processed by
scripts/alphagenome_atlas_avi.pyvia theannotate,query, andregionsubcommands. - Boundary markers: Absent.
- Capability inventory: Performs gRPC network requests to the AlphaGenome Atlas API and executes local file system reads/writes for genomic data.
- Sanitization: Input data is strictly parsed into structured
VariantRecordobjects using specialized libraries (pysam, polars), which effectively sanitizes the input for its intended scientific use case.
Audit Metadata