The Agent Skills Directory

[EXTERNAL_DOWNLOADS]: The skill facilitates communication with the public MMseqs2 server (api.colabfold.com) to generate protein sequence alignments. This external dependency is a well-known scientific service and is explicitly disclosed in the skill's metadata and instructions as a standard part of the workflow.
[COMMAND_EXECUTION]: The skill provides usage instructions for the colabfold_batch command line tool to perform protein folding tasks, which is consistent with its stated purpose in biological modeling.
[DATA_EXFILTRATION]: Transmission of protein sequences to api.colabfold.com is the primary and disclosed function of the ColabFold runner for MSA generation, representing expected behavior for this bioinformatics tool.

alphafold2