alphafold-database-access
Pass
Audited by Gen Agent Trust Hub on Sep 18, 2026
Risk Level: SAFEEXTERNAL_DOWNLOADSCOMMAND_EXECUTIONINDIRECT_PROMPT_INJECTION
Full Analysis
- [EXTERNAL_DOWNLOADS]: Fetches protein structures and metadata from the official AlphaFold DB REST API and servers at alphafold.ebi.ac.uk. It also references official public datasets hosted on Google Cloud Storage (gs://public-datasets-deepmind-alphafold-v4) and BigQuery.
- [COMMAND_EXECUTION]: Includes Python recipes that use the subprocess module to call the gsutil command-line tool for bulk dataset downloads. The code includes input validation for the taxonomy ID.
- [INDIRECT_PROMPT_INJECTION]: The skill ingests structural protein data and JSON metadata from external sources. These are processed using specialized parsers like BioPython's MMCIFParser and standard JSON libraries. The capability inventory includes file system writes and subprocess calls, but the data parsed is structural and does not influence command execution.
Audit Metadata