bcftools-variant-manipulation
Pass
Audited by Gen Agent Trust Hub on Oct 14, 2026
Risk Level: SAFEEXTERNAL_DOWNLOADSCOMMAND_EXECUTION
Full Analysis
- [EXTERNAL_DOWNLOADS]: The skill provides instructions for installing bcftools through established and well-known package management systems, specifically Bioconda and Homebrew. These are standard methods for acquiring scientific software.
- [COMMAND_EXECUTION]: Numerous command-line examples are provided for variant calling, filtering, and annotation using the
bcftoolsbinary. These commands are localized to genomic file formats (VCF/BCF) and are entirely consistent with the skill's intended purpose. - [SAFE]: Extensive review of the instructions and scripts revealed no evidence of malicious patterns. There are no attempts at prompt injection, data exfiltration, credential theft, or obfuscation. The skill references official documentation and the authoritative source code repository for the samtools/bcftools project.
Audit Metadata