pdb-database
Pass
Audited by Gen Agent Trust Hub on Sep 18, 2026
Risk Level: SAFEEXTERNAL_DOWNLOADSCOMMAND_EXECUTIONINDIRECT_PROMPT_INJECTION
Full Analysis
- [EXTERNAL_DOWNLOADS]: Fetches structural biology metadata and molecular coordinate files (mmCIF, PDB, FASTA) from official RCSB PDB endpoints, including search.rcsb.org, data.rcsb.org, and files.rcsb.org.\n- [COMMAND_EXECUTION]: Instructs the user to install standard Python dependencies (
requestsandbiopython) using thepippackage manager.\n- [INDIRECT_PROMPT_INJECTION]: The skill ingests data from external APIs which could theoretically contain malicious instructions.\n - Ingestion points: Metadata and sequence data retrieved from RCSB PDB's GraphQL and REST APIs.\n
- Boundary markers: None identified in the provided code snippets or instructions.\n
- Capability inventory: The skill demonstrates capabilities for network communication (
requests) and local file writes (open().write()).\n - Sanitization: No specific sanitization or validation of the API-returned content is implemented before it is processed by the agent.
Audit Metadata