pysam-genomic-files
Pass
Audited by Gen Agent Trust Hub on Oct 14, 2026
Risk Level: SAFE
Full Analysis
- [SAFE]: The skill provides educational content and API references for the 'pysam' library, which is a standard tool in the bioinformatics community for interacting with htslib.
- [EXTERNAL_DOWNLOADS]: The skill includes instructions to install 'pysam' via the standard Python package manager (pip). The package is a well-known, legitimate library and its inclusion is appropriate for the skill's stated purpose.
- [COMMAND_EXECUTION]: The skill demonstrates how to use the 'pysam' Python API to call samtools and bcftools functions. These are documented features of the library intended for genomic data processing and do not involve arbitrary or dangerous command execution.
- [SAFE]: No evidence of prompt injection, data exfiltration, obfuscation, or persistence mechanisms was found within the instructions or code snippets.
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