single-cell-annotation

Installation
SKILL.md

Single Cell RNA-seq Cell Type Annotation


Metadata

Short Description: Best practices for annotating cell types in single-cell RNA-seq data using marker-based, automated, and reference-based approaches.

Authors: Distilled from "Single-cell best practices" by Luecken, M.D. et al.

Affiliations: Helmholtz Munich, Wellcome Sanger Institute, Harvard Medical School, and contributors

Version: 1.0

Last Updated: January 2025

License: CC BY 4.0

Commercial Use: ✅ Allowed

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