The Agent Skills Directory

[SAFE]: The skill provides legitimate documentation and code templates for structural biology and biophysics simulations. Analysis of the Python code reveals standard usage of simulation engines and analysis frameworks without any malicious patterns such as credential theft, data exfiltration, or unauthorized command execution.
[EXTERNAL_DOWNLOADS]: The skill references and provides installation instructions for established scientific Python packages including openmm, mdanalysis, nglview, pdbfixer, and openff-toolkit from standard repositories (conda-forge, PyPI). All referenced URLs target official documentation or well-known academic/research organization sites.

molecular-dynamics