scanpy
Pass
Audited by Gen Agent Trust Hub on Oct 2, 2026
Risk Level: SAFE
Full Analysis
- [SAFE]: No security risks were identified. The skill is designed for exploratory scRNA-seq analysis and follows standard procedural norms for bioinformatics workflows.
- [EXTERNAL_DOWNLOADS]: The skill provides instructions for installing necessary software via reputable package managers including
uv pip,Homebrew,apt-get, andwinget. It references official repositories such as CRAN (cloud.r-project.org) and well-known GitHub organizations for specialized tools likeseurat-disk. - [COMMAND_EXECUTION]: The documentation includes commands for system setup and data format conversion (e.g., using
Rscript). These are appropriately scoped to the technical requirements of the analysis and include safety instructions for the agent regarding administrative privileges. - [DATA_EXPOSURE]: The analysis verified that the skill does not access sensitive system paths or credentials. All file operations are restricted to single-cell data formats and user-specified output directories.
Audit Metadata