deeptools

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Audited by Snyk on Aug 17, 2026

Risk Level: MEDIUM
Full Analysis

MEDIUM W011: Third-party content exposure detected (indirect prompt injection risk).

  • Third-party content exposure detected (medium risk: 0.30). The runtime workflow ingests user-provided file contents indirectly via the generated deepTools commands (e.g., uv run python scripts/validate_files.py ... reads BED text, and the workflow later passes BAM/BED paths into multiBamSummary, computeMatrix, etc., which consume those files’ contents).

Issues (1)

W011
MEDIUM

Third-party content exposure detected (indirect prompt injection risk).

Audit Metadata
Risk Level
MEDIUM
Analyzed
Aug 17, 2026, 02:13 AM
Issues
1