The Agent Skills Directory

[EXTERNAL_DOWNLOADS]: The skill interacts with established scientific databases to fetch glycosylation data, including GlyConnect (hosted by the Swiss Institute of Bioinformatics at expasy.org), GlyTouCan, and services from DTU Health Tech. These are well-known academic resources.
[COMMAND_EXECUTION]: Provides instructions for installing and using the glycoshield command-line tool via the uv package manager for molecular dynamics analysis.
[INDIRECT_PROMPT_INJECTION]: The skill accepts protein sequences and identifiers as input for analysis and API queries, representing a standard ingestion surface for bioinformatics tools.
Ingestion points: Protein sequences and UniProt IDs in SKILL.md and references/glycan_databases.md.
Boundary markers: Absent.
Capability inventory: Performs requests.get operations to specific scientific domains and local computational analysis.
Sanitization: Includes basic string normalization (e.g., .upper()) but lacks strict validation against adversarial metadata in sequence inputs.
[SAFE]: All identified external resources and tool dependencies originate from reputable research organizations and are consistent with the skill's primary purpose of glycoengineering.

glycoengineering