mat-db-optimade
Installation
SKILL.md
mat-db-optimade
Goal
To query experimental crystal structures (e.g. from the Crystallography Open Database - COD, NOMAD) using the standardized REST API provided by OPTIMADE, and to extract the structural data and metadata in a JSON format.
Instructions
Step 1. Querying an OPTIMADE Database
Use the query_optimade.py script to fetch structure data based on standard OPTIMADE query language filters.
# Env: base-agent
python .agents/skills/mat-db-optimade/scripts/query_optimade.py \
results.json \
--filter 'elements HAS ALL "Na", "Cl"' \
--provider cod \
--max_results 5