The Agent Skills Directory

[EXTERNAL_DOWNLOADS]: The skill facilitates the installation of the pathml package and its associated scientific ecosystem (including PyTorch, Dask, and Scanpy) from official package registries.
[REMOTE_CODE_EXECUTION]: Includes a feature for remote cell segmentation through the DeepCell API at https://deepcell.org/api/predict, which is an established scientific service for biological image analysis.
[COMMAND_EXECUTION]: Provides standard command-line instructions for environment setup, package management, and high-performance computing (HPC) job submission via SLURM, which are standard practices for the intended scientific research use case.
[SAFE]: The skill follows security best practices by recommending HDF5 for data storage and suggesting the use of safe loading methods for configuration files.

pathml