pdb-database
Pass
Audited by Gen Agent Trust Hub on Mar 31, 2026
Risk Level: SAFEEXTERNAL_DOWNLOADSCOMMAND_EXECUTIONDATA_EXFILTRATIONPROMPT_INJECTION
Full Analysis
- [EXTERNAL_DOWNLOADS]: The skill downloads coordinate files in PDB and mmCIF formats from the official RCSB PDB file server at files.rcsb.org.
- [COMMAND_EXECUTION]: A troubleshooting utility in the API reference uses subprocess.run to execute curl for verifying connectivity to the RCSB Data API.
- [DATA_EXFILTRATION]: The skill sends queries to data.rcsb.org and graphql.rcsb.org to retrieve biological metadata and search results.
- [PROMPT_INJECTION]: The skill ingests external data from the PDB database, such as structure titles and descriptions, which represents an indirect prompt injection surface. This is a common characteristic of skills that process external databases.
Audit Metadata