The Agent Skills Directory

[EXTERNAL_DOWNLOADS]: The skill facilitates communication with the official Reactome APIs located at reactome.org. It also utilizes the reactome2py Python library, which is the standard programmatic client for this service.
[COMMAND_EXECUTION]: The helper script scripts/reactome_query.py performs standard network requests and file I/O operations necessary for its stated purpose of pathway analysis and data retrieval. It reads gene lists from local files and writes analysis results back to the filesystem.
[DATA_EXFILTRATION]: While the skill transmits gene and protein lists to external servers, these operations are directed exclusively to the well-known scientific service at reactome.org and are required for the pathway enrichment functionality.

reactome-database