tooluniverse-cancer-classification
Cancer Classification via OncoTree
Standardize cancer type nomenclature using the OncoTree ontology. Resolves free-text tumor descriptions to structured codes with UMLS/NCI cross-references, enabling downstream use in OncoKB variant annotation and GDC cohort selection.
When to Use
Apply when researcher asks about:
- "What is the OncoTree code for [tumor description]?"
- "Find all subtypes of [cancer type]"
- "What cancers originate in [tissue]?"
- "I need the tumor type code for OncoKB annotation"
- "What is the TCGA/COSMIC code for [cancer]?"
- "List all CNS/Brain cancer subtypes"
- "What NCI code corresponds to glioblastoma?"
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