tooluniverse-protein-structure-retrieval
Pass
Audited by Gen Agent Trust Hub on May 27, 2026
Risk Level: SAFE
Full Analysis
- [SAFE]: The skill facilitates the retrieval of protein structure information from well-known and trusted scientific repositories, including the Protein Data Bank (RCSB PDB) and AlphaFold DB.
- [EXTERNAL_DOWNLOADS]: The skill instructions and examples describe fetching data from external bioinformatics services. These sources (RCSB, PDBe, AlphaFold) are recognized scientific services, and the data retrieval is central to the skill's legitimate research purpose.
- [COMMAND_EXECUTION]: Usage examples demonstrate saving retrieved structure data to the local filesystem (e.g., writing
.pdband.ciffiles) using Python's standard file operations. This is a standard workflow for bioinformatics tools and is presented as a user-directed example rather than a hidden persistence mechanism. - [PROMPT_INJECTION]: The instructions contain standard directives for domain reasoning and quality assessment (e.g., 'LOOK UP DON'T GUESS', 'Never assume PDB IDs') which are safety-oriented and intended to ensure accuracy in scientific reporting rather than bypassing agent constraints.
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