skills/nvidia-bionemo/bionemo-agent-toolkit/msa-structure-prediction-pipeline/Snyk

msa-structure-prediction-pipeline

Warn

Audited by Snyk on Aug 13, 2026

Risk Level: MEDIUM

Full Analysis

MEDIUM W011: Third-party content exposure detected (indirect prompt injection risk).

Third-party content exposure detected (medium risk: 0.30). Runtime workflow posts user-provided query_sequence to the outsider-controlled MSA-Search/paired endpoints and then ingests the returned alignment text (a3m_alignment) into OpenFold3’s msa field before prediction.

Issues (1)

W011

MEDIUM

Third-party content exposure detected (indirect prompt injection risk).

Audit Metadata

Risk Level

MEDIUM

Analyzed

Aug 13, 2026, 07:51 AM

Issues

1

Security Audit — snyk — msa-structure-prediction-pipeline