The Agent Skills Directory

[COMMAND_EXECUTION]: Provides shell commands to automate the deployment of the OpenFold3 NIM via Docker and verify service availability using health check endpoints.
[EXTERNAL_DOWNLOADS]: Fetches the OpenFold3 NIM container image and required model weights from the official NVIDIA Container Registry (nvcr.io). These are recognized as trusted vendor resources.
[PRIVILEGE_ESCALATION]: The local setup script utilizes chmod 777 on the LOCAL_NIM_CACHE directory. While intended to resolve permission conflicts between the host and the container, this is an insecure practice that grants global read, write, and execute permissions to the directory.
[INDIRECT_PROMPT_INJECTION]:
Ingestion points: User-provided biological sequences (protein, DNA, RNA) and SMILES strings are ingested and processed in SKILL.md and references/examples.md.
Boundary markers: The skill uses standard FASTA headers (e.g., >query\n) to delimit sequence data within the request payload.
Capability inventory: The skill possesses Bash execution capabilities for Docker management and uses requests.post for outbound network communication.
Sanitization: The skill lacks explicit sanitization or structural validation for sequences before they are interpolated into the API request alignment fields, creating a potential surface for injection via malformed sequence data.

openfold3-nim