EAGLE3 Pipeline Validation

Verify that an EAGLE3 pipeline run completed successfully and meets quality criteria.

Step 0 — Identify the experiment

Find the most recent experiment directory (or ask the user for the path):

ls -td experiments/cicd/cicd_* | head -5

Each experiment directory has one subdirectory per task (numbered 0–3), each containing a log file whose name varies by launch mode (Slurm: sbatch_*.out, local Docker: *.log).

Step 1 — Check task outcomes

Match the log files generally and read the tail of each: