NV-Segment-CTMR

Purpose

• Used for running NV-Segment-CTMR on CT or MRI NIfTI volumes and recording label-map evidence. Not for clinical interpretation.
• Use the wrapper exactly as documented; do not replace the upstream entrypoint with a handwritten implementation.
• Manifest I/O: inputs are ct_or_mr_volume; outputs are label_map and result_json.

Instructions

• Read skill_manifest.yaml before changing arguments, side effects, or validation gates.
• Run scripts/run_ctmr.py through the documented command below; keep outputs under a caller-provided run directory.
• If a host agent exposes run_script, use run_script("scripts/run_ctmr.py", args=[...]); otherwise run the Bash/Python command shown below.
• Check the emitted JSON and paired verifier guidance before treating the run as evidence.

Available Scripts