The Agent Skills Directory

[INDIRECT_PROMPT_INJECTION]: The skill processes biomolecular sequences and Multiple Sequence Alignments (MSAs) which are interpolated into JSON payloads for structure prediction requests.
Ingestion points: Data enters through the sequence, smiles, ccd_codes, and msa.alignment fields in SKILL.md and references/api.md.
Boundary markers: Instructions do not mandate the use of delimiters or escaping when the agent incorporates user data into the request body.
Capability inventory: The skill performs network operations via requests.post and local file writes using open() in SKILL.md and references/examples.md.
Sanitization: No explicit sanitization of sequence or alignment strings is performed before payload construction.
[COMMAND_EXECUTION]: The skill provides shell commands for local container orchestration and service monitoring.
Evidence: Includes scripts in SKILL.md for registry authentication, launching the NIM container with docker run, and executing curl loops for readiness checks.
[EXTERNAL_DOWNLOADS]: Fetches required deployment artifacts from vendor-controlled infrastructure.
Evidence: Downloads the openfold3 NIM container image and model weights (10–15 GB) from nvcr.io as documented in SKILL.md.

openfold3-nim