skills/omicverse/omicverse-skills/bulk-rna-seq-differential-expression-with-omicverse/Gen Agent Trust Hub
bulk-rna-seq-differential-expression-with-omicverse
Pass
Audited by Gen Agent Trust Hub on Aug 6, 2026
Risk Level: SAFEEXTERNAL_DOWNLOADSPROMPT_INJECTION
Full Analysis
- [EXTERNAL_DOWNLOADS]: The skill fetches gene ID mapping pairs and pathway databases using official
omicverseutility functions (download_geneid_annotation_pair,download_pathway_database). These resources are required for genomic analysis and are retrieved from the official sources associated with the OmicVerse library. - [PROMPT_INJECTION]: The skill processes untrusted gene expression data provided by the user in CSV/TSV format, representing an indirect injection surface.
- Ingestion points: Reads local count matrices via
ov.pd.read_csvin bothSKILL.mdandreference.md. - Boundary markers: None; the data is treated as numerical input for statistical computations.
- Capability inventory: File system reading, network access for downloading data assets, and generation of statistical plots.
- Sanitization: Standard bioinformatic cleaning (ID mapping, duplicate removal) is performed, but there is no specific validation for prompt-based threats in the input files.
Audit Metadata