omicverse-microbiome-16s-amplicon-dada2
Pass
Audited by Gen Agent Trust Hub on Aug 6, 2026
Risk Level: SAFE
Full Analysis
- [EXTERNAL_DOWNLOADS]: The skill utilizes the
ov.alignment.fetch_rdpfunction to retrieve reference databases (such as RDP or SILVA) required for taxonomic classification. This is a standard and expected operation for microbiome analysis skills. - [COMMAND_EXECUTION]: The workflow involves executing external bioinformatics binaries, specifically
vsearchandcutadapt, via theov.alignment.amplicon_16s_pipelinewrapper. These are industry-standard tools for sequence merging, filtering, and denoising. - [REMOTE_CODE_EXECUTION]: The skill mentions optional dependencies like
pydeseq2andskbio, which may require installation via standard package managers. No suspicious or unverified package sources are referenced. - [DATA_EXFILTRATION]: The skill processes user-provided sequencing data (FASTQ files) within a specified local
workdir. There are no instructions or patterns suggesting the exfiltration of sensitive data or unauthorized network communication.
Audit Metadata