The Agent Skills Directory

[EXTERNAL_DOWNLOADS]: The skill documents the use of library-specific functions such as ov.alignment.fetch_rdp() and ov.alignment.fetch_sintax_ref() to download biological reference databases necessary for taxonomic classification.
[COMMAND_EXECUTION]: The instructions reference the installation and use of standard external Python dependencies, including pydeseq2 and scikit-bio, which are common tools in the bioinformatics ecosystem.
[SAFE]: The skill's operations are consistent with its stated purpose of providing a biological analysis workflow. File system access is restricted to user-provided input and working directories, and network activity is limited to fetching public reference datasets.

omicverse-microbiome-16s-amplicon-dada2