The Agent Skills Directory

[SAFE]: The skill's behavior is consistent with its stated purpose of genomic data processing and does not exhibit any malicious patterns, obfuscation, or data exfiltration.- [EXTERNAL_DOWNLOADS]: The skill relies on standard bioinformatics packages including omicverse, scib-metrics, scvi-tools, scanorama, and concord. These are reputable tools within the genomics community.- [COMMAND_EXECUTION]: The provided smoke test script scripts/batch_integration_smoke.py executes a local computational workflow for validation without invoking dangerous system commands or accessing sensitive resources.- [INDIRECT_PROMPT_INJECTION]: The skill ingests AnnData objects for genomic analysis, which represent an ingestion point for external data. 1. Ingestion points: adata input in SKILL.md and scripts/batch_integration_smoke.py. 2. Boundary markers: None. 3. Capability inventory: Execution of bioinformatics algorithms via the omicverse library. 4. Sanitization: None required for the mathematical processing of genomic matrices.

omicverse-single-cell-batch-integration